David's test template Title

Sample Abstract Description Summary using HTML
(This can be edited in the Description section of the application properties)

LinkData mission
LinkData's mission is to promote open data by providing a simple way for anyone to create Linked Open Data and publish it. LinkData's unique approach is easy to use for both novice and expert. It provides a simple field based template system combined with hosting that differs from any other Converter to RDF . By this we support the "Web for ALL" mission of the inventors of the World Wide Web - the W3C Consortium.

We aim to generate new knowledge with this service by creating a linked repository for web data of any type ranging from human related information to scientific biological data, as well as by bringing diverse data creators and application developers together in collaboration.

Open standards
LinkData provides data as a free service using Linked Open Data (LOD) open standards for RDF document works. LinkData respects both the spirit of Open Information and as well as Intellectual property by implementing the Creative Commons technical infrastructure of copyright licenses and tools for classifying works, and by encouraging good practices for attribution and provenance within user's linked open data. LinkData ascribes to the W3C "elements of openness" .

Semantic web principles
LinkData is built on Semantic web principles to publish and link users' works as "Linked Data" on the "Web of Data" using RDF (Resource Definition Format). Our goal is also to make it easy for users to build a fabric of organized knowledge using vocabularies known as ontologies. ( See Semantic web FAQ ).
We strive for a system to be created and curated by those who understand their own languages best by using key concepts of international web design .
LinkData also refers to the organization of distributed partners we invite to collaborate and spread this activity globally.

Transgenic Arapbidopsis thaliana plant with synthesized DNA
designed by Finalist participant of the first GenoCon 2010 Challenge

Rating

useful

Application

Play
JavaScript
CSS
HTML
ReadMe
Snapshots

function init(){
 sessionStorage.clear();
 $.each(LinkData.getWorks(),function(k, v){
	 $.each(LinkData.getFiles(v), function(fk, fv) {
	   loadData(v,fv);
	 });
 });
}

function getSequence(type,name){
  var data = JSON.parse(sessionStorage.getItem(type));
  var seq = data[name];
  return seq;
}

var map = {};

function reverseTranslation(ps) {
 var ns = "";
 var i = 0;
 for (i=0; i<ps.length;i++) {
 ns += map[ps.charAt(i)];
 }
 return ns;
}

window.onload = function() {
 init();
 // 1. Obtain protein sequences of HPS.
 // 1. HPSのたんぱく質配列を取得
 $("#result").append("[STEP 1]");
 var hpsSeq = getSequence("protein","http://www.uniprot.org/uniprot/Q9LBW4");
 $("#result").append("HPS Protein sequence has been obtained from LinkData " + hpsSeq + " ");
 // 2. Reverse translate the obtained protein sequences of HPS to DNA sequences.
 // 2. 取得したHPSのたんぱく質配列をDNA配列に逆翻訳
 $("#result").append("[STEP 2]");
 var hpsDnaSeq = reverseTranslation(hpsSeq);
 $("#result").append("HPS DNA Sequence has been generated " + hpsDnaSeq + " ");

// 3. Obtain protein sequences of PHI.
 // 3. PHIのたんぱく質配列を取得
 $("#result").append("[STEP 3]");
 var phiSeq = getSequence("protein","http://www.uniprot.org/uniprot/Q9LBW5");
 $("#result").append("PHI Protein sequence has been obtained from LinkData " + phiSeq + " ");
 
 // 4. Reverse-translate the obtained protein sequences of PHI to DNA sequences.
 // 4. 取得したPHIのたんぱく質配列をDNA配列に逆翻訳
 $("#result").append("[STEP 4]");
 var phiDnaSeq = reverseTranslation(phiSeq);
 $("#result").append("PHI DNA Sequence has been generated " + phiDnaSeq + " ");

// 5. Combine those two DNA sequences.
 // 5. ２つのDNA配列を結合
 $("#result").append("[STEP 5]");
 var dnaSeq = hpsDnaSeq + phiDnaSeq;
 $("#result").append("Designed sequence is " + dnaSeq + " ");
};

map.M = "atg";
map.F = "ttt";
map.L = "tta";
map.I = "att";
map.V = "gtt";
map.S = "tct";
map.P = "cct";
map.T = "act";
map.A = "gct";
map.Y = "tat";
map.H = "cat";
map.Q = "caa";
map.N = "aat";
map.K = "aaa";
map.D = "gat";
map.E = "gaa";
map.C = "tgt";
map.W = "tgg";
map.S = "agt";
map.R = "cgt";
map.G = "ggt";

Welcome to the HTML editor!

Just type the HTML and it will be shown below.

Lorem ipsum dolor sit amet, consectetur adipiscing elit. Sed elementum neque id magna. Mauris sollicitudin nisi sit amet sem. Etiam sit amet lectus a velit interdum facilisis. Vestibulum ante ipsum primis in faucibus orci luctus et ultrices posuere cubilia Curae; In tincidunt eleifend neque. Maecenas interdum, neque in fringilla pellentesque, lacus massa eleifend elit, nec scelerisque nulla orci a nunc. Quisque sollicitudin. Sed pulvinar lacus id lacus. Vestibulum imperdiet tellus eget risus. Quisque libero nisl, feugiat eu, euismod at, elementum eget, tellus. Clesto.com

Google logo

Heading in h2, som more sample text

Phasellus sem odio, varius quis, cursus at, ullamcorper eget, turpis. Maecenas a mi. Mauris dignissim lectus malesuada odio. Duis elit arcu, lobortis ut, porta ac, venenatis ornare, odio. Pellentesque scelerisque. Ut elementum laoreet massa. Suspendisse hendrerit odio eget turpis. Cras tellus dui, malesuada id, adipiscing ut, laoreet sed, magna. Phasellus scelerisque aliquet ligula. Quisque vitae elit sit amet enim suscipit interdum. Curabitur laoreet, mauris sit amet aliquet interdum, pede sapien malesuada metus, in tincidunt turpis justo id arcu. Donec gravida odio ac lectus. Nam rutrum ante in nisi laoreet aliquet. Sed at ante.

Heading in h3, som more sample text

Nulla facilisi. Nullam cursus scelerisque erat. Praesent convallis rhoncus dui. In hac habitasse platea dictumst. Nullam pellentesque. Mauris ac orci. Donec dictum. Etiam purus tortor, elementum a, posuere nec, pulvinar id, ipsum. Pellentesque habitant morbi tristique senectus et netus et malesuada fames ac turpis egestas. Quisque vel justo. Nullam posuere purus sed arcu.

Nulla facilisi.

Pellentesque habitant morbi

Quisque vel justo.

Nullam posuere purus sed arcu.

Fork this app as your new one download

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Contributor Send Message	DavidGifford
Forked from (Parent App)	GenoCon 's GenoCon Challenge B - The simplest sample
Run count	283
Website
License
Fork count	1
Created date	Sep 12, 2012
Last update date	Oct 5, 2012

Forked from (Parent App)

GenoCon Challenge B - The simplest sample Contributor: GenoCon Update: Oct 23, 2012 1264 runs

Forked (Child App)

forked:GenoCon Abstract Guide Contributor: DavidGifford Update: Oct 5, 2012 162 runs

Input Data
Related Ideas

LinkData work list used as input data in this application.
You can change input data and execute application if you change the checkbox.

GenoCon2 ChallengeB sample data Contributor: GenoCon Update: Sep 21, 2012
2232 Downloads
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8 Applications

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protein

signal_peptide

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